dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00275
Location and strand information: 288571 - 289683 (-)
Family: 2.A.3.9.4
Protein type: TC
Protein description: Spore germination protein YndE

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00276
Location and strand information: 289732 - 291324 (-)
Family: 9.A.11.1.2
Protein type: TC
Protein description: Spore germination protein B1

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00277
Location and strand information: 291471 - 292097 (-)
Family: null
Protein type: null
Protein description: Uridine kinase

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00278
Location and strand information: 292255 - 293355 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00279
Location and strand information: 293341 - 294657 (-)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8314
Protein molecular weight: 50549.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00280
Location and strand information: 294677 - 296224 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00281
Location and strand information: 296199 - 297326 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00282
Location and strand information: 297323 - 298381 (-)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 5.994
Protein molecular weight: 40600.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00283
Location and strand information: 298602 - 299828 (+)
Family: null
Protein type: null
Protein description: N-carbamoyl-L-amino-acid hydrolase

Gene clsuter ID: MGYG000002414_1|CGC4
Gene ID: MGYG000002414_00284
Location and strand information: 300110 - 301243 (+)
Family: 3.D.2.1.1
Protein type: TC
Protein description: Alanine dehydrogenase

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002414_00275	Spore germination protein YndE	TC	288571	289683	-	2.A.3.9.4
MGYG000002414_00276	Spore germination protein B1	TC	289732	291324	-	9.A.11.1.2
MGYG000002414_00277	Uridine kinase	null	291471	292097	-	PRK
MGYG000002414_00278	hypothetical protein	null	292255	293355	+	Beta_elim_lyase
MGYG000002414_00279	hypothetical protein	CAZyme	293341	294657	-	GT2
MGYG000002414_00280	hypothetical protein	null	294677	296224	-	No domain
MGYG000002414_00281	hypothetical protein	null	296199	297326	-	PS_pyruv_trans
MGYG000002414_00282	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	297323	298381	-	GT2
MGYG000002414_00283	N-carbamoyl-L-amino-acid hydrolase	null	298602	299828	+	Peptidase_M20
MGYG000002414_00284	Alanine dehydrogenase	TC	300110	301243	+	3.D.2.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature